IL_9T4R_050
3D structure
- PDB id
- 9T4R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S initiation complex with a natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- UACAAAG*CAUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 9T4R|1|A|U|1296
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9T4R_050 not in the Motif Atlas
- Homologous match to IL_6CZR_160
- Geometric discrepancy: 0.252
- The information below is about IL_6CZR_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.1
- Basepair signature
- cWW-tWH-tWH-L-R-L-R-tWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
9T4R|1|A|U|1257
9T4R|1|A|A|1258
9T4R|1|A|C|1259
9T4R|1|A|A|1260
9T4R|1|A|A|1261
9T4R|1|A|A|1262
9T4R|1|A|G|1263
*
9T4R|1|A|C|1294
9T4R|1|A|A|1295
9T4R|1|A|U|1296
9T4R|1|A|A|1297
9T4R|1|A|A|1298
9T4R|1|A|A|1299
9T4R|1|A|G|1300
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- Small ribosomal subunit protein uS7
- Chain I
- Small ribosomal subunit protein uS9
- Chain N
- Small ribosomal subunit protein uS14B
- Chain j
- Small ribosomal subunit protein uS10
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