IL_9TZ5_032
3D structure
- PDB id
- 9TZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Triple Stack Doxycycline Bound 50S Subunit of the Coxiella burnetii Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.22 Å
Loop
- Sequence
- UCCCAAAA*UA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9TZ5_032 not in the Motif Atlas
- Homologous match to IL_7A0S_034
- Geometric discrepancy: 0.213
- The information below is about IL_7A0S_034
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_46868.1
- Basepair signature
- cWW-L-cWW-L-L-R-L-R
- Number of instances in this motif group
- 5
Unit IDs
9TZ5|1|a|U|1010
9TZ5|1|a|C|1011
9TZ5|1|a|C|1012
9TZ5|1|a|C|1013
9TZ5|1|a|A|1014
9TZ5|1|a|A|1015
9TZ5|1|a|A|1016
9TZ5|1|a|A|1017
*
9TZ5|1|a|U|1157
9TZ5|1|a|A|1158
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain e
- Large ribosomal subunit protein bL20
- Chain i
- Large ribosomal subunit protein uL13
Coloring options: