IL_9UZM_008

3D structure

PDB id

9UZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

40S ribosome without initiation factors

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GUUAUGGU*AACGUC

Length

14 nucleotides

Bulged bases

9UZM|1|2|G|113, 9UZM|1|2|G|114

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9UZM|1|2|G|108
9UZM|1|2|U|109
9UZM|1|2|U|110
9UZM|1|2|A|111
9UZM|1|2|U|112
9UZM|1|2|G|113
9UZM|1|2|G|114
9UZM|1|2|U|115
*
9UZM|1|2|A|338
9UZM|1|2|A|339
9UZM|1|2|C|340
9UZM|1|2|G|341
9UZM|1|2|U|342
9UZM|1|2|C|343

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

Small ribosomal subunit protein eS4

Chain K

Small ribosomal subunit protein eS8

Chain N

Small ribosomal subunit protein uS17