IL_9W0N_141
3D structure
- PDB id
- 9W0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGUAG*CGUAGAGA
- Length
- 13 nucleotides
- Bulged bases
- 9W0N|1|3|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9W0N_141 not in the Motif Atlas
- Homologous match to IL_8B0X_034
- Geometric discrepancy: 0.1245
- The information below is about IL_8B0X_034
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_71972.2
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
9W0N|1|3|U|684
9W0N|1|3|G|685
9W0N|1|3|U|686
9W0N|1|3|A|687
9W0N|1|3|G|688
*
9W0N|1|3|C|699
9W0N|1|3|G|700
9W0N|1|3|U|701
9W0N|1|3|A|702
9W0N|1|3|G|703
9W0N|1|3|A|704
9W0N|1|3|G|705
9W0N|1|3|A|706
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain P
- Small ribosomal subunit protein uS11
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