IL_9WW5_048
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- GGAUC*GUGCAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW5_048 not in the Motif Atlas
- Homologous match to IL_8GLP_051
- Geometric discrepancy: 0.0573
- The information below is about IL_8GLP_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47352.3
- Basepair signature
- cWW-cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
9WW5|1|AA|G|1425
9WW5|1|AA|G|1426
9WW5|1|AA|A|1427
9WW5|1|AA|U|1428
9WW5|1|AA|C|1429
*
9WW5|1|AA|G|1455
9WW5|1|AA|U|1456
9WW5|1|AA|G|1457
9WW5|1|AA|C|1458
9WW5|1|AA|A|1459
9WW5|1|AA|C|1460
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AS
- 60S ribosomal protein L18
- Chain Ad
- 60S ribosomal protein L29
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