IL_9WW5_200
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- AG(OMG)GCAAG*CU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW5_200 not in the Motif Atlas
- Homologous match to IL_9SUM_165
- Geometric discrepancy: 0.16
- The information below is about IL_9SUM_165
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11411.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 14
Unit IDs
9WW5|1|BA|A|599
9WW5|1|BA|G|600
9WW5|1|BA|OMG|601
9WW5|1|BA|G|602
9WW5|1|BA|C|603
9WW5|1|BA|A|604
9WW5|1|BA|A|605
9WW5|1|BA|G|606
*
9WW5|1|BA|C|636
9WW5|1|BA|U|637
Current chains
- Chain BA
- 18S rRNA (1740-MER)
Nearby chains
- Chain BV
- 40S ribosomal protein S2
- Chain BX
- 40S ribosomal protein S9
- Chain Bf
- Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein
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