IL_9WW5_255
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- 9WW5|1|BA|A|1825
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW5_255 not in the Motif Atlas
- Homologous match to IL_9PN5_223
- Geometric discrepancy: 0.3022
- The information below is about IL_9PN5_223
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37443.2
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 11
Unit IDs
9WW5|1|BA|C|1708
9WW5|1|BA|G|1709
9WW5|1|BA|C|1710
9WW5|1|BA|U|1711
*
9WW5|1|BA|A|1822
9WW5|1|BA|A|1823
9WW5|1|BA|A|1824
9WW5|1|BA|A|1825
9WW5|1|BA|G|1826
Current chains
- Chain BA
- 18S rRNA (1740-MER)
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain Ap
- 60S ribosomal protein L41
- Chain BQ
- 40S ribosomal protein S23
Coloring options: