IL_9Y79_064
3D structure
- PDB id
- 9Y79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation loosely coupled complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 9Y79|1|a|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Y79_064 not in the Motif Atlas
- Homologous match to IL_7A0S_004
- Geometric discrepancy: 0.4449
- The information below is about IL_7A0S_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_94910.1
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
9Y79|1|a|G|81
9Y79|1|a|U|82
9Y79|1|a|A|83
9Y79|1|a|A|84
9Y79|1|a|G|85
*
9Y79|1|a|C|97
9Y79|1|a|G|98
9Y79|1|a|U|99
9Y79|1|a|U|100
9Y79|1|a|A|101
9Y79|1|a|U|102
9Y79|1|a|A|103
9Y79|1|a|A|104
9Y79|1|a|C|105
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L24
- Chain e
- Large ribosomal subunit protein uL29
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