J3_1NWY_012
3D structure
- PDB id
- 1NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UC*GUUAAG*CAUCA
- Length
- 13 nucleotides
- Bulged bases
- 1NWY|1|0|U|2807, 1NWY|1|0|U|2808, 1NWY|1|0|A|2810
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_1NWY_012 not in the Motif Atlas
- Homologous match to J3_7A0S_013
- Geometric discrepancy: 0.2992
- The information below is about J3_7A0S_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76911.2
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
1NWY|1|0|U|2789
1NWY|1|0|C|2790
*
1NWY|1|0|G|2806
1NWY|1|0|U|2807
1NWY|1|0|U|2808
1NWY|1|0|A|2809
1NWY|1|0|A|2810
1NWY|1|0|G|2811
*
1NWY|1|0|C|2857
1NWY|1|0|A|2858
1NWY|1|0|U|2859
1NWY|1|0|C|2860
1NWY|1|0|A|2861
Current chains
- Chain 0
- 23S RIBOSOMAL RRNA
Nearby chains
- Chain B
- ribosomal protein L3
- Chain L
- ribosomal protein L17
- Chain N
- ribosomal protein L19
- Chain Z
- ribosomal protein L32
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