3D structure

PDB id
2AW7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. This file contains the 30S subunit of the second 70S ribosome. The entire crystal structure contains two 70S ribosomes and is described in remark 400.
Experimental method
X-RAY DIFFRACTION
Resolution
3.46 Å

Loop

Sequence
CAAUG*CGUAGUCC*GUCG
Length
17 nucleotides
Bulged bases
2AW7|1|A|U|1240, 2AW7|1|A|C|1302
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_2AW7_009 not in the Motif Atlas
Geometric match to J3_5J7L_011
Geometric discrepancy: 0.1971
The information below is about J3_5J7L_011
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_37047.6
Basepair signature
cWW-cSS-tHW-F-F-F-cWW-cWW-F-cSH-F-F
Number of instances in this motif group
4

Unit IDs

2AW7|1|A|C|1237
2AW7|1|A|A|1238
2AW7|1|A|A|1239
2AW7|1|A|U|1240
2AW7|1|A|G|1241
*
2AW7|1|A|C|1296
2AW7|1|A|G|1297
2AW7|1|A|U|1298
2AW7|1|A|A|1299
2AW7|1|A|G|1300
2AW7|1|A|U|1301
2AW7|1|A|C|1302
2AW7|1|A|C|1303
*
2AW7|1|A|G|1334
2AW7|1|A|U|1335
2AW7|1|A|C|1336
2AW7|1|A|G|1337

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain G
30S ribosomal protein S7
Chain M
30S ribosomal protein S13

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2699 s