J3_3BBX_003
3D structure
- PDB id
- 3BBX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 10 Å
Loop
- Sequence
- CAG*CGAAC*GAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3BBX_003 not in the Motif Atlas
- Homologous match to J3_7A0S_005
- Geometric discrepancy: 0.3928
- The information below is about J3_7A0S_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44724.7
- Basepair signature
- cWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
3BBX|1|B|C|698
3BBX|1|B|A|699
3BBX|1|B|G|700
*
3BBX|1|B|C|732
3BBX|1|B|G|733
3BBX|1|B|A|734
3BBX|1|B|A|735
3BBX|1|B|C|736
*
3BBX|1|B|G|760
3BBX|1|B|A|761
3BBX|1|B|U|762
3BBX|1|B|G|763
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
Coloring options: