J3_3J2H_014

3D structure

PDB id

3J2H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

18.8 Å

Loop

Sequence

CGG*CUUGA*UGACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3J2H_014 not in the Motif Atlas

Homologous match to J3_5J7L_051

Geometric discrepancy: 0.311

The information below is about J3_5J7L_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_17385.4

Basepair signature

cWW-F-cWW-cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

3J2H|1|N|C|586
3J2H|1|N|G|587
3J2H|1|N|G|588
*
3J2H|1|N|C|651
3J2H|1|N|U|652
3J2H|1|N|U|653
3J2H|1|N|G|654
3J2H|1|N|A|655
*
3J2H|1|N|U|751
3J2H|1|N|G|752
3J2H|1|N|A|753
3J2H|1|N|C|754
3J2H|1|N|G|755

Current chains

Chain N

16S rRNA

Nearby chains