J3_3J8G_005

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CGGAAG*CAG*CAAG

Length

13 nucleotides

Bulged bases

3J8G|1|B|A|1302

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3J8G_005 not in the Motif Atlas

Homologous match to J3_5J7L_041

Geometric discrepancy: 0.19

The information below is about J3_5J7L_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

3J8G|1|B|C|1298
3J8G|1|B|G|1299
3J8G|1|B|G|1300
3J8G|1|B|A|1301
3J8G|1|B|A|1302
3J8G|1|B|G|1303
*
3J8G|1|B|C|1625
3J8G|1|B|A|1626
3J8G|1|B|G|1627
*
3J8G|1|B|C|1639
3J8G|1|B|A|1640
3J8G|1|B|A|1641
3J8G|1|B|G|1642

Current chains

Chain B

23S rRNA

Nearby chains