J3_3JA1_018
3D structure
- PDB id
- 3JA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUUG*CGGAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 3JA1|1|SA|U|871
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3JA1_018 not in the Motif Atlas
- Homologous match to J3_5J7L_004
- Geometric discrepancy: 0.1447
- The information below is about J3_5J7L_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
3JA1|1|SA|C|826
3JA1|1|SA|U|827
3JA1|1|SA|U|828
3JA1|1|SA|G|829
*
3JA1|1|SA|C|857
3JA1|1|SA|G|858
3JA1|1|SA|G|859
3JA1|1|SA|A|860
3JA1|1|SA|G|861
*
3JA1|1|SA|C|868
3JA1|1|SA|G|869
3JA1|1|SA|U|870
3JA1|1|SA|U|871
3JA1|1|SA|A|872
3JA1|1|SA|A|873
3JA1|1|SA|G|874
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain SB
- 30S ribosomal protein S2
- Chain SH
- 30S ribosomal protein S8
- Chain SU
- 30S ribosomal protein S21
Coloring options: