J3_4UY8_005
3D structure
- PDB id
- 4UY8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAAG*CCCAAAC*GUG
- Length
- 14 nucleotides
- Bulged bases
- 4UY8|1|A|A|1609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4UY8_005 not in the Motif Atlas
- Homologous match to J3_7A0S_007
- Geometric discrepancy: 0.1442
- The information below is about J3_7A0S_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_71677.1
- Basepair signature
- cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
4UY8|1|A|C|1306
4UY8|1|A|A|1307
4UY8|1|A|A|1308
4UY8|1|A|G|1309
*
4UY8|1|A|C|1605
4UY8|1|A|C|1606
4UY8|1|A|C|1607
4UY8|1|A|A|1608
4UY8|1|A|A|1609
4UY8|1|A|A|1610
4UY8|1|A|C|1611
*
4UY8|1|A|G|1620
4UY8|1|A|U|1621
4UY8|1|A|G|1622
Current chains
- Chain A
- RRNA-23S RIBOSOMAL RNA
Nearby chains
- Chain 2
- 50S RIBOSOMAL PROTEIN L34
Coloring options: