J3_4V5H_034

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GGGACG*CC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V5H_034 not in the Motif Atlas

Homologous match to J3_5J7L_069

Geometric discrepancy: 0.1223

The information below is about J3_5J7L_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.2

Basepair signature

cWW-F-cWW-F-tHH-F-tHS-tHS-cWW

Number of instances in this motif group

4

Unit IDs

4V5H|1|BB|G|1424
4V5H|1|BB|G|1425
4V5H|1|BB|G|1426
4V5H|1|BB|A|1427
4V5H|1|BB|C|1428
4V5H|1|BB|G|1429
*
4V5H|1|BB|C|1564
4V5H|1|BB|C|1565
*
4V5H|1|BB|G|1568
4V5H|1|BB|A|1569
4V5H|1|BB|A|1570
4V5H|1|BB|A|1571
4V5H|1|BB|A|1572
4V5H|1|BB|G|1573
4V5H|1|BB|C|1574

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BC

50S RIBOSOMAL PROTEIN L2