J3_4V71_033
3D structure
- PDB id
- 4V71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 20 Å
Loop
- Sequence
- GC*GCGAAAAGAAC*GAGUGAAAAAGAACC
- Length
- 28 nucleotides
- Bulged bases
- 4V71|1|BA|A|504, 4V71|1|BA|A|508
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V71_033 not in the Motif Atlas
- Homologous match to J3_9DFE_002
- Geometric discrepancy: 0.2026
- The information below is about J3_9DFE_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17917.1
- Basepair signature
- cWW-tWH-cSS-cWW-tSH-tHH-cWW-F-F-tWW-tSS-cSS-tWW-tSH-tWH-cSW-F-tHS-cWW-F
- Number of instances in this motif group
- 9
Unit IDs
4V71|1|BA|G|30
4V71|1|BA|C|31
*
4V71|1|BA|G|474
4V71|1|BA|C|475
4V71|1|BA|G|476
4V71|1|BA|A|477
4V71|1|BA|A|478
4V71|1|BA|A|479
4V71|1|BA|A|480
4V71|1|BA|G|481
4V71|1|BA|A|482
4V71|1|BA|A|483
4V71|1|BA|C|484
*
4V71|1|BA|G|496
4V71|1|BA|A|497
4V71|1|BA|G|498
4V71|1|BA|U|499
4V71|1|BA|G|500
4V71|1|BA|A|501
4V71|1|BA|A|502
4V71|1|BA|A|503
4V71|1|BA|A|504
4V71|1|BA|A|505
4V71|1|BA|G|506
4V71|1|BA|A|507
4V71|1|BA|A|508
4V71|1|BA|C|509
4V71|1|BA|C|510
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BQ
- 50S ribosomal protein L20
- Chain BS
- 50S ribosomal protein L22
- Chain BU
- 50S ribosomal protein L24
Coloring options: