3D structure

PDB id
4V75 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
CUUG*CGGAG*CGUUAAG
Length
16 nucleotides
Bulged bases
4V75|1|AA|U|871
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4V75_004 not in the Motif Atlas
Homologous match to J3_5J7L_004
Geometric discrepancy: 0.1946
The information below is about J3_5J7L_004
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_85054.4
Basepair signature
cWW-tWW-tHS-F-cWW-tHS-cWW-F
Number of instances in this motif group
3

Unit IDs

4V75|1|AA|C|826
4V75|1|AA|U|827
4V75|1|AA|U|828
4V75|1|AA|G|829
*
4V75|1|AA|C|857
4V75|1|AA|G|858
4V75|1|AA|G|859
4V75|1|AA|A|860
4V75|1|AA|G|861
*
4V75|1|AA|C|868
4V75|1|AA|G|869
4V75|1|AA|U|870
4V75|1|AA|U|871
4V75|1|AA|A|872
4V75|1|AA|A|873
4V75|1|AA|G|874

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AB
30S ribosomal protein S2
Chain AH
30S ribosomal protein S8

Coloring options:


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