J3_4V76_004

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CUUG*CGGAG*CGUUAAG

Length

16 nucleotides

Bulged bases

4V76|1|AA|U|871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V76_004 not in the Motif Atlas

Homologous match to J3_4LFB_001

Geometric discrepancy: 0.2176

The information below is about J3_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.4

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

3

Unit IDs

4V76|1|AA|C|826
4V76|1|AA|U|827
4V76|1|AA|U|828
4V76|1|AA|G|829
*
4V76|1|AA|C|857
4V76|1|AA|G|858
4V76|1|AA|G|859
4V76|1|AA|A|860
4V76|1|AA|G|861
*
4V76|1|AA|C|868
4V76|1|AA|G|869
4V76|1|AA|U|870
4V76|1|AA|U|871
4V76|1|AA|A|872
4V76|1|AA|A|873
4V76|1|AA|G|874

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AH

30S ribosomal protein S8

Chain AU

30S ribosomal protein S21