J3_4V76_018

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CGGAAG*CAG*CAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V76_018 not in the Motif Atlas

Homologous match to J3_5J7L_041

Geometric discrepancy: 0.1508

The information below is about J3_5J7L_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

4V76|1|BA|C|1298
4V76|1|BA|G|1299
4V76|1|BA|G|1300
4V76|1|BA|A|1301
4V76|1|BA|A|1302
4V76|1|BA|G|1303
*
4V76|1|BA|C|1625
4V76|1|BA|A|1626
4V76|1|BA|G|1627
*
4V76|1|BA|C|1639
4V76|1|BA|A|1640
4V76|1|BA|A|1641
4V76|1|BA|G|1642

Current chains

Chain BA

23S ribosomal RNA

Nearby chains