J3_4V76_028

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GCCUAAC*GGGGAAUAU*AGC

Length

19 nucleotides

Bulged bases

4V76|1|AA|C|48, 4V76|1|AA|A|50, 4V76|1|AA|A|51

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V76_028 not in the Motif Atlas

Homologous match to J3_5J7L_050

Geometric discrepancy: 0.2376

The information below is about J3_5J7L_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46317.4

Basepair signature

cWW-cWW-cSW-F-cWW-F-F-F-F-cWW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

4V76|1|AA|G|46
4V76|1|AA|C|47
4V76|1|AA|C|48
4V76|1|AA|U|49
4V76|1|AA|A|50
4V76|1|AA|A|51
4V76|1|AA|C|52
*
4V76|1|AA|G|359
4V76|1|AA|G|360
4V76|1|AA|G|361
4V76|1|AA|G|362
4V76|1|AA|A|363
4V76|1|AA|A|364
4V76|1|AA|U|365
4V76|1|AA|A|366
4V76|1|AA|U|367
*
4V76|1|AA|A|393
4V76|1|AA|G|394
4V76|1|AA|C|395

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AL

30S ribosomal protein S12

Chain AP

30S ribosomal protein S16