J3_4V77_012
3D structure
- PDB id
- 4V77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 17 Å
Loop
- Sequence
- CAAUGG*UCGUAGUCC*GUCG
- Length
- 19 nucleotides
- Bulged bases
- 4V77|1|AA|U|1240
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V77_012 not in the Motif Atlas
- Homologous match to J3_5J7L_011
- Geometric discrepancy: 0.5673
- The information below is about J3_5J7L_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_37047.6
- Basepair signature
- cWW-cSS-tHW-F-F-F-cWW-cWW-F-cSH-F-F
- Number of instances in this motif group
- 4
Unit IDs
4V77|1|AA|C|1237
4V77|1|AA|A|1238
4V77|1|AA|A|1239
4V77|1|AA|U|1240
4V77|1|AA|G|1241
4V77|1|AA|G|1242
*
4V77|1|AA|U|1295
4V77|1|AA|C|1296
4V77|1|AA|G|1297
4V77|1|AA|U|1298
4V77|1|AA|A|1299
4V77|1|AA|G|1300
4V77|1|AA|U|1301
4V77|1|AA|C|1302
4V77|1|AA|C|1303
*
4V77|1|AA|G|1334
4V77|1|AA|U|1335
4V77|1|AA|C|1336
4V77|1|AA|G|1337
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain A3
- Transfer RNA; tRNA
- Chain AG
- 30S ribosomal protein S7
- Chain AM
- 30S ribosomal protein S13
Coloring options: