J3_4V77_026

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GCCUAAC*GGGGAAUAU*AGC

Length

19 nucleotides

Bulged bases

4V77|1|AA|C|48, 4V77|1|AA|A|51

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V77_026 not in the Motif Atlas

Homologous match to J3_4LFB_014

Geometric discrepancy: 0.1905

The information below is about J3_4LFB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46317.4

Basepair signature

cWW-cWW-cSW-F-cWW-F-F-F-F-cWW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

4V77|1|AA|G|46
4V77|1|AA|C|47
4V77|1|AA|C|48
4V77|1|AA|U|49
4V77|1|AA|A|50
4V77|1|AA|A|51
4V77|1|AA|C|52
*
4V77|1|AA|G|359
4V77|1|AA|G|360
4V77|1|AA|G|361
4V77|1|AA|G|362
4V77|1|AA|A|363
4V77|1|AA|A|364
4V77|1|AA|U|365
4V77|1|AA|A|366
4V77|1|AA|U|367
*
4V77|1|AA|A|393
4V77|1|AA|G|394
4V77|1|AA|C|395

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AL

30S ribosomal protein S12

Chain AP

30S ribosomal protein S16