J3_4V7A_021

3D structure

PDB id

4V7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GCCUAAC*GGGGAAUAU*AGC

Length

19 nucleotides

Bulged bases

4V7A|1|AA|C|48, 4V7A|1|AA|A|50, 4V7A|1|AA|A|51

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V7A_021 not in the Motif Atlas

Homologous match to J3_5J7L_050

Geometric discrepancy: 0.2035

The information below is about J3_5J7L_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46317.4

Basepair signature

cWW-cWW-cSW-F-cWW-F-F-F-F-cWW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

4V7A|1|AA|G|46
4V7A|1|AA|C|47
4V7A|1|AA|C|48
4V7A|1|AA|U|49
4V7A|1|AA|A|50
4V7A|1|AA|A|51
4V7A|1|AA|C|52
*
4V7A|1|AA|G|359
4V7A|1|AA|G|360
4V7A|1|AA|G|361
4V7A|1|AA|G|362
4V7A|1|AA|A|363
4V7A|1|AA|A|364
4V7A|1|AA|U|365
4V7A|1|AA|A|366
4V7A|1|AA|U|367
*
4V7A|1|AA|A|393
4V7A|1|AA|G|394
4V7A|1|AA|C|395

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AL

30S ribosomal protein S12

Chain AP

30S ribosomal protein S16