J3_4V8J_034
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- UG*CGCCGAUGG*CAG
- Length
- 14 nucleotides
- Bulged bases
- 4V8J|1|AA|U|706
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V8J_034 not in the Motif Atlas
- Homologous match to J3_4LFB_012
- Geometric discrepancy: 0.1127
- The information below is about J3_4LFB_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.4
- Basepair signature
- cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4V8J|1|AA|U|655
4V8J|1|AA|G|656
*
4V8J|1|AA|C|700
4V8J|1|AA|G|701
4V8J|1|AA|C|702
4V8J|1|AA|C|703
4V8J|1|AA|G|704
4V8J|1|AA|A|705
4V8J|1|AA|U|706
4V8J|1|AA|G|707
4V8J|1|AA|G|708
*
4V8J|1|AA|C|715
4V8J|1|AA|A|716
4V8J|1|AA|G|717
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AF
- 30S ribosomal protein S6
- Chain AK
- 30S ribosomal protein S11
- Chain AO
- 30S ribosomal protein S15
- Chain AR
- 30S ribosomal protein S18
- Chain BD
- 50S ribosomal protein L2
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