J3_4WT8_001
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CUAG*CGAAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 4WT8|1|Ab|U|849
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WT8_001 not in the Motif Atlas
- Homologous match to J3_4LFB_001
- Geometric discrepancy: 0.084
- The information below is about J3_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
4WT8|1|Ab|C|810
4WT8|1|Ab|U|811
4WT8|1|Ab|A|812
4WT8|1|Ab|G|813
*
4WT8|1|Ab|C|835
4WT8|1|Ab|G|836
4WT8|1|Ab|A|837
4WT8|1|Ab|A|838
4WT8|1|Ab|G|839
*
4WT8|1|Ab|C|846
4WT8|1|Ab|G|847
4WT8|1|Ab|U|848
4WT8|1|Ab|U|849
4WT8|1|Ab|A|850
4WT8|1|Ab|A|851
4WT8|1|Ab|G|852
Current chains
- Chain Ab
- RNA (1504-MER)
Nearby chains
- Chain AA
- 30S ribosomal protein S2
- Chain AH
- 30S ribosomal protein S8
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