J3_4WT8_041
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CGG*CUAGA*UGACG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WT8_041 not in the Motif Atlas
- Homologous match to J3_4LFB_015
- Geometric discrepancy: 0.0791
- The information below is about J3_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.4
- Basepair signature
- cWW-F-cWW-cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
4WT8|1|Bb|C|570
4WT8|1|Bb|G|571
4WT8|1|Bb|G|572
*
4WT8|1|Bb|C|635
4WT8|1|Bb|U|636
4WT8|1|Bb|A|637
4WT8|1|Bb|G|638
4WT8|1|Bb|A|639
*
4WT8|1|Bb|U|735
4WT8|1|Bb|G|736
4WT8|1|Bb|A|737
4WT8|1|Bb|C|738
4WT8|1|Bb|G|739
Current chains
- Chain Bb
- RNA (1504-MER)
Nearby chains
- Chain BH
- 30S ribosomal protein S8
- Chain BL
- 30S ribosomal protein S12
- Chain BO
- 30S ribosomal protein S15
- Chain BR
- 30S ribosomal protein S17
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