J3_4WT8_045
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CUUGACAU*ACAG*CUUACG
- Length
- 18 nucleotides
- Bulged bases
- 4WT8|1|Bb|C|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WT8_045 not in the Motif Atlas
- Homologous match to J3_4LFB_016
- Geometric discrepancy: 0.1433
- The information below is about J3_4LFB_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76475.2
- Basepair signature
- cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
- Number of instances in this motif group
- 2
Unit IDs
4WT8|1|Bb|C|968
4WT8|1|Bb|U|969
4WT8|1|Bb|U|970
4WT8|1|Bb|G|971
4WT8|1|Bb|A|972
4WT8|1|Bb|C|973
4WT8|1|Bb|A|974
4WT8|1|Bb|U|975
*
4WT8|1|Bb|A|1027
4WT8|1|Bb|C|1028
4WT8|1|Bb|A|1029
4WT8|1|Bb|G|1030
*
4WT8|1|Bb|C|1192
4WT8|1|Bb|U|1193
4WT8|1|Bb|U|1194
4WT8|1|Bb|A|1195
4WT8|1|Bb|C|1196
4WT8|1|Bb|G|1197
Current chains
- Chain Bb
- RNA (1504-MER)
Nearby chains
- Chain BN
- 30S ribosomal protein S14 type Z
Coloring options: