J3_4WT8_066
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CC*GUGGAU*AAUCG
- Length
- 13 nucleotides
- Bulged bases
- 4WT8|1|D1|G|2842, 4WT8|1|D1|A|2844
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WT8_066 not in the Motif Atlas
- Homologous match to J3_9DFE_019
- Geometric discrepancy: 0.1414
- The information below is about J3_9DFE_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76911.2
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
4WT8|1|D1|C|2823
4WT8|1|D1|C|2824
*
4WT8|1|D1|G|2840
4WT8|1|D1|U|2841
4WT8|1|D1|G|2842
4WT8|1|D1|G|2843
4WT8|1|D1|A|2844
4WT8|1|D1|U|2845
*
4WT8|1|D1|A|2891
4WT8|1|D1|A|2892
4WT8|1|D1|U|2893
4WT8|1|D1|C|2894
4WT8|1|D1|G|2895
Current chains
- Chain D1
- 23S rRNA (2899-MER)
Nearby chains
- Chain D6
- 50S ribosomal protein L32
- Chain DC
- 50S ribosomal protein L3
- Chain DQ
- 50S ribosomal protein L17
- Chain DS
- 50S ribosomal protein L19
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