J3_5AN9_002

3D structure

PDB id

5AN9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanism of eIF6 release from the nascent 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUC*GAG*CAAAAG

Length

12 nucleotides

Bulged bases

5AN9|1|N|A|3036

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_5AN9_002 not in the Motif Atlas

Homologous match to J3_5TBW_013

Geometric discrepancy: 0.0974

The information below is about J3_5TBW_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_91491.5

Basepair signature

cWW-F-tWW-tHW-cWW-F-cWW

Number of instances in this motif group

7

Unit IDs

5AN9|1|N|C|2997
5AN9|1|N|U|2998
5AN9|1|N|C|2999
*
5AN9|1|N|G|3023
5AN9|1|N|A|3024
5AN9|1|N|G|3025
*
5AN9|1|N|C|3034
5AN9|1|N|A|3035
5AN9|1|N|A|3036
5AN9|1|N|A|3037
5AN9|1|N|A|3038
5AN9|1|N|G|3039

Current chains

Chain N

26S RIBOSOMAL RNA

Nearby chains