J3_5M73_002
3D structure
- PDB id
- 5M73 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human SRP S domain with SRP72 RNA-binding domain
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UC*GCCUAAGG*CG
- Length
- 12 nucleotides
- Bulged bases
- 5M73|1|E|C|169
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5M73_002 not in the Motif Atlas
- Geometric match to J3_1MFQ_002
- Geometric discrepancy: 0.309
- The information below is about J3_1MFQ_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_70599.1
- Basepair signature
- cWW-F-cWW-F-F-cWW-F-F
- Number of instances in this motif group
- 3
Unit IDs
5M73|1|E|U|128
5M73|1|E|C|129
*
5M73|1|E|G|168
5M73|1|E|C|169
5M73|1|E|C|170
5M73|1|E|U|171
5M73|1|E|A|172
5M73|1|E|A|173
5M73|1|E|G|174
5M73|1|E|G|175
*
5M73|1|E|C|221
5M73|1|E|G|222
Current chains
- Chain E
- Human gene for small cytoplasmic 7SL RNA (7L30.1)
Nearby chains
- Chain G
- Signal recognition particle subunit SRP68
Coloring options: