J3_6ERI_021
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ERI_021 not in the Motif Atlas
- Homologous match to J3_4LFB_003
- Geometric discrepancy: 0.1021
- The information below is about J3_4LFB_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44359.1
- Basepair signature
- cWW-tSH-cWW-F-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6ERI|1|BA|U|893
6ERI|1|BA|G|894
6ERI|1|BA|G|895
6ERI|1|BA|A|896
*
6ERI|1|BA|U|1184
6ERI|1|BA|A|1185
6ERI|1|BA|C|1186
*
6ERI|1|BA|G|1286
6ERI|1|BA|G|1287
6ERI|1|BA|A|1288
6ERI|1|BA|A|1289
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BG
- 30S ribosomal protein S7, chloroplastic
- Chain BI
- 30S ribosomal protein S9, chloroplastic
- Chain BM
- 30S ribosomal protein S13, chloroplastic
- Chain BV
- Ribosome-binding factor PSRP1, chloroplastic
- Chain BW
- 30S ribosomal protein S31, chloroplastic
Coloring options: