J3_6FTG_017
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- AC*GAGAAUU*ACACU
- Length
- 14 nucleotides
- Bulged bases
- 6FTG|1|w|A|62, 6FTG|1|w|U|63
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6FTG_017 not in the Motif Atlas
- Homologous match to J3_8C3A_060
- Geometric discrepancy: 0.1842
- The information below is about J3_8C3A_060
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_38265.2
- Basepair signature
- cWW-F-cWW-F-cWW-F-cWW-F
- Number of instances in this motif group
- 8
Unit IDs
6FTG|1|w|A|44
6FTG|1|w|C|45
*
6FTG|1|w|G|58
6FTG|1|w|A|59
6FTG|1|w|G|60
6FTG|1|w|A|61
6FTG|1|w|A|62
6FTG|1|w|U|63
6FTG|1|w|U|64
*
6FTG|1|w|A|95
6FTG|1|w|C|96
6FTG|1|w|A|97
6FTG|1|w|C|98
6FTG|1|w|U|99
Current chains
- Chain w
- 5.8S ribosomal RNA
Nearby chains
- Chain X
- uL23
- Chain h
- eL29
- Chain j
- Ribosomal protein L37
- Chain l
- eL39
- Chain u
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: