J3_6FTG_021

3D structure

PDB id

6FTG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes

Experimental method

ELECTRON MICROSCOPY

Resolution

9.1 Å

Loop

Sequence

UU*AGAAG*CGUGG

Length

12 nucleotides

Bulged bases

6FTG|1|u|A|1805, 6FTG|1|u|U|1834

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTG|1|u|U|1726
6FTG|1|u|U|1727
*
6FTG|1|u|A|1802
6FTG|1|u|G|1803
6FTG|1|u|A|1804
6FTG|1|u|A|1805
6FTG|1|u|G|1806
*
6FTG|1|u|C|1832
6FTG|1|u|G|1833
6FTG|1|u|U|1834
6FTG|1|u|G|1835
6FTG|1|u|G|1836

Current chains

Chain u

28S ribosomal RNA

Nearby chains

Chain F

uL30

Chain T

eL21

Chain b

60S ribosomal protein L29