J3_6FXC_057
3D structure
- PDB id
- 6FXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.76 Å
Loop
- Sequence
- CUUGACAU*ACAG*CUUAUG
- Length
- 18 nucleotides
- Bulged bases
- 6FXC|1|Aa|U|1224
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6FXC_057 not in the Motif Atlas
- Homologous match to J3_4LFB_016
- Geometric discrepancy: 0.2155
- The information below is about J3_4LFB_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76475.2
- Basepair signature
- cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
- Number of instances in this motif group
- 2
Unit IDs
6FXC|1|Aa|C|999
6FXC|1|Aa|U|1000
6FXC|1|Aa|U|1001
6FXC|1|Aa|G|1002
6FXC|1|Aa|A|1003
6FXC|1|Aa|C|1004
6FXC|1|Aa|A|1005
6FXC|1|Aa|U|1006
*
6FXC|1|Aa|A|1055
6FXC|1|Aa|C|1056
6FXC|1|Aa|A|1057
6FXC|1|Aa|G|1058
*
6FXC|1|Aa|C|1220
6FXC|1|Aa|U|1221
6FXC|1|Aa|U|1222
6FXC|1|Aa|A|1223
6FXC|1|Aa|U|1224
6FXC|1|Aa|G|1225
Current chains
- Chain Aa
- 16S ribosomal RNA
Nearby chains
- Chain An
- 30S ribosomal protein S14 type Z
Coloring options: