J3_6HRM_030
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- CUUGACAU*ACAG*CUUACG
- Length
- 18 nucleotides
- Bulged bases
- 6HRM|1|1|C|1214
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6HRM_030 not in the Motif Atlas
- Homologous match to J3_4LFB_016
- Geometric discrepancy: 0.1332
- The information below is about J3_4LFB_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_28881.1
- Basepair signature
- cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW
- Number of instances in this motif group
- 2
Unit IDs
6HRM|1|1|C|990
6HRM|1|1|U|991
6HRM|1|1|U|992
6HRM|1|1|G|993
6HRM|1|1|A|994
6HRM|1|1|C|995
6HRM|1|1|A|996
6HRM|1|1|U|997
*
6HRM|1|1|A|1044
6HRM|1|1|C|1045
6HRM|1|1|A|1046
6HRM|1|1|G|1047
*
6HRM|1|1|C|1210
6HRM|1|1|U|1211
6HRM|1|1|U|1212
6HRM|1|1|A|1213
6HRM|1|1|C|1214
6HRM|1|1|G|1215
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain s
- 30S ribosomal protein S14
Coloring options: