J3_6HTQ_010
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CAUC*GUUG*CAUUAAAG
- Length
- 16 nucleotides
- Bulged bases
- 6HTQ|1|A|A|2547
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6HTQ_010 not in the Motif Atlas
- Geometric match to J3_4V9F_009
- Geometric discrepancy: 0.2496
- The information below is about J3_4V9F_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_68010.1
- Basepair signature
- cWW-cWH-cWW-cSS-tWH-tSS-F-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
6HTQ|1|A|C|2546
6HTQ|1|A|A|2547
6HTQ|1|A|U|2548
6HTQ|1|A|C|2549
*
6HTQ|1|A|G|2574
6HTQ|1|A|U|2575
6HTQ|1|A|U|2576
6HTQ|1|A|G|2577
*
6HTQ|1|A|C|2589
6HTQ|1|A|A|2590
6HTQ|1|A|U|2591
6HTQ|1|A|U|2592
6HTQ|1|A|A|2593
6HTQ|1|A|A|2594
6HTQ|1|A|A|2595
6HTQ|1|A|G|2596
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain K
- 50S ribosomal protein L14
- Chain x
- GTP pyrophosphokinase
Coloring options: