J3_6HTQ_016
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CUAA*UGCAG*CAUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 6HTQ|1|a|U|881
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6HTQ_016 not in the Motif Atlas
- Homologous match to J3_5J7L_004
- Geometric discrepancy: 0.1807
- The information below is about J3_5J7L_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
6HTQ|1|a|C|835
6HTQ|1|a|U|836
6HTQ|1|a|A|837
6HTQ|1|a|A|838
*
6HTQ|1|a|U|867
6HTQ|1|a|G|868
6HTQ|1|a|C|869
6HTQ|1|a|A|870
6HTQ|1|a|G|871
*
6HTQ|1|a|C|878
6HTQ|1|a|A|879
6HTQ|1|a|U|880
6HTQ|1|a|U|881
6HTQ|1|a|A|882
6HTQ|1|a|A|883
6HTQ|1|a|G|884
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain e
- 30S ribosomal protein S5
- Chain h
- 30S ribosomal protein S8
Coloring options: