J3_6NUO_059
3D structure
- PDB id
- 6NUO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GC*GUGAAAAGAAC*GAGUGAAAUAGAGCC
- Length
- 28 nucleotides
- Bulged bases
- 6NUO|1|RA|U|529, 6NUO|1|RA|G|533
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6NUO_059 not in the Motif Atlas
- Homologous match to J3_9DFE_002
- Geometric discrepancy: 0.0735
- The information below is about J3_9DFE_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_92134.2
- Basepair signature
- cWW-cWW-cWW-F-tWH-cSS-tSS-tSH-tSH-tWW-tHH-tWH-tWW-F-F-cSS-cSW-F-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
6NUO|1|RA|G|30
6NUO|1|RA|C|31
*
6NUO|1|RA|G|500
6NUO|1|RA|U|501
6NUO|1|RA|G|502
6NUO|1|RA|A|503
6NUO|1|RA|A|504
6NUO|1|RA|A|505
6NUO|1|RA|A|506
6NUO|1|RA|G|507
6NUO|1|RA|A|508
6NUO|1|RA|A|509
6NUO|1|RA|C|510
*
6NUO|1|RA|G|521
6NUO|1|RA|A|522
6NUO|1|RA|G|523
6NUO|1|RA|U|524
6NUO|1|RA|G|525
6NUO|1|RA|A|526
6NUO|1|RA|A|527
6NUO|1|RA|A|528
6NUO|1|RA|U|529
6NUO|1|RA|A|530
6NUO|1|RA|G|531
6NUO|1|RA|A|532
6NUO|1|RA|G|533
6NUO|1|RA|C|534
6NUO|1|RA|C|535
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain RU
- 50S ribosomal protein L20
- Chain RW
- 50S ribosomal protein L22
- Chain RY
- 50S ribosomal protein L24
Coloring options: