J3_6O90_027
3D structure
- PDB id
- 6O90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- UAAG*CGUAAAC*GUA
- Length
- 14 nucleotides
- Bulged bases
- 6O90|1|A|U|1650, 6O90|1|A|A|1652, 6O90|1|A|A|1653
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6O90_027 not in the Motif Atlas
- Homologous match to J3_7A0S_007
- Geometric discrepancy: 0.2153
- The information below is about J3_7A0S_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47341.1
- Basepair signature
- cWW-tHH-F-tHW-tHS-tWW-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6O90|1|A|U|1342
6O90|1|A|A|1343
6O90|1|A|A|1344
6O90|1|A|G|1345
*
6O90|1|A|C|1648
6O90|1|A|G|1649
6O90|1|A|U|1650
6O90|1|A|A|1651
6O90|1|A|A|1652
6O90|1|A|A|1653
6O90|1|A|C|1654
*
6O90|1|A|G|1663
6O90|1|A|U|1664
6O90|1|A|A|1665
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L34
Coloring options: