J3_6O90_032
3D structure
- PDB id
- 6O90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- CC*GUAGAU*AAUCG
- Length
- 13 nucleotides
- Bulged bases
- 6O90|1|A|A|2844, 6O90|1|A|A|2846
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6O90_032 not in the Motif Atlas
- Homologous match to J3_4WF9_021
- Geometric discrepancy: 0.2479
- The information below is about J3_4WF9_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76911.2
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
6O90|1|A|C|2825
6O90|1|A|C|2826
*
6O90|1|A|G|2842
6O90|1|A|U|2843
6O90|1|A|A|2844
6O90|1|A|G|2845
6O90|1|A|A|2846
6O90|1|A|U|2847
*
6O90|1|A|A|2893
6O90|1|A|A|2894
6O90|1|A|U|2895
6O90|1|A|C|2896
6O90|1|A|G|2897
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L32
- Chain D
- 50S ribosomal protein L3
- Chain O
- 50S ribosomal protein L17
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