J3_6S0X_035
3D structure
- PDB id
- 6S0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- CGUCAG*CGCAACC*GAUGACG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6S0X_035 not in the Motif Atlas
- Homologous match to J3_6CZR_023
- Geometric discrepancy: 0.4523
- The information below is about J3_6CZR_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08394.2
- Basepair signature
- cWW-F-F-F-tHW-F-F-F-tSS-F-cWW-cWW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6S0X|1|a|C|1074
6S0X|1|a|G|1075
6S0X|1|a|U|1076
6S0X|1|a|C|1077
6S0X|1|a|A|1078
6S0X|1|a|G|1079
*
6S0X|1|a|C|1118
6S0X|1|a|G|1119
6S0X|1|a|C|1120
6S0X|1|a|A|1121
6S0X|1|a|A|1122
6S0X|1|a|C|1123
6S0X|1|a|C|1124
*
6S0X|1|a|G|1197
6S0X|1|a|A|1198
6S0X|1|a|U|1199
6S0X|1|a|G|1200
6S0X|1|a|A|1201
6S0X|1|a|C|1202
6S0X|1|a|G|1203
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain c
- 30S ribosomal protein S3
- Chain e
- 30S ribosomal protein S5
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
Coloring options: