J3_6T59_017
3D structure
- PDB id
- 6T59 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- AC*GAGAAUU*ACACU
- Length
- 14 nucleotides
- Bulged bases
- 6T59|1|84|A|62, 6T59|1|84|U|63
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6T59_017 not in the Motif Atlas
- Homologous match to J3_8C3A_060
- Geometric discrepancy: 0.1723
- The information below is about J3_8C3A_060
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_38265.2
- Basepair signature
- cWW-F-cWW-F-cWW-F-cWW-F
- Number of instances in this motif group
- 8
Unit IDs
6T59|1|84|A|44
6T59|1|84|C|45
*
6T59|1|84|G|58
6T59|1|84|A|59
6T59|1|84|G|60
6T59|1|84|A|61
6T59|1|84|A|62
6T59|1|84|U|63
6T59|1|84|U|64
*
6T59|1|84|A|95
6T59|1|84|C|96
6T59|1|84|A|97
6T59|1|84|C|98
6T59|1|84|U|99
Current chains
- Chain 84
- 5.8S ribosomal RNA
Nearby chains
- Chain 54
- Large subunit ribosomal RNA; LSU rRNA
- Chain X3
- uL23
- Chain h3
- uL29
- Chain j3
- Ribosomal protein L37
- Chain l3
- eL39
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