J3_6W6P_025
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAAUG*CUCAGUUC*GCCG
- Length
- 17 nucleotides
- Bulged bases
- 6W6P|1|a|U|1255, 6W6P|1|a|U|1317
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6W6P_025 not in the Motif Atlas
- Homologous match to J3_5J7L_011
- Geometric discrepancy: 0.1395
- The information below is about J3_5J7L_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_37047.6
- Basepair signature
- cWW-cSS-tHW-F-F-F-cWW-cWW-F-cSH-F-F
- Number of instances in this motif group
- 4
Unit IDs
6W6P|1|a|C|1252
6W6P|1|a|A|1253
6W6P|1|a|A|1254
6W6P|1|a|U|1255
6W6P|1|a|G|1256
*
6W6P|1|a|C|1311
6W6P|1|a|U|1312
6W6P|1|a|C|1313
6W6P|1|a|A|1314
6W6P|1|a|G|1315
6W6P|1|a|U|1316
6W6P|1|a|U|1317
6W6P|1|a|C|1318
*
6W6P|1|a|G|1349
6W6P|1|a|C|1350
6W6P|1|a|C|1351
6W6P|1|a|G|1352
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain m
- 30S ribosomal protein S13
Coloring options: