J3_6XE0_004
3D structure
- PDB id
- 6XE0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of NusG-CTD bound to 70S ribosome (30S: NusG-CTD fragment)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- CUUG*CGGAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 6XE0|1|W|U|871
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6XE0_004 not in the Motif Atlas
- Homologous match to J3_5J7L_004
- Geometric discrepancy: 0.2239
- The information below is about J3_5J7L_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
6XE0|1|W|C|826
6XE0|1|W|U|827
6XE0|1|W|U|828
6XE0|1|W|G|829
*
6XE0|1|W|C|857
6XE0|1|W|G|858
6XE0|1|W|G|859
6XE0|1|W|A|860
6XE0|1|W|G|861
*
6XE0|1|W|C|868
6XE0|1|W|G|869
6XE0|1|W|U|870
6XE0|1|W|U|871
6XE0|1|W|A|872
6XE0|1|W|A|873
6XE0|1|W|G|874
Current chains
- Chain W
- 16s rRNA
Nearby chains
- Chain A
- 30S ribosomal protein S2
- Chain G
- 30S ribosomal protein S8
- Chain U
- 30S ribosomal protein S21
Coloring options: