J3_6ZU5_003
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAACUA*UAG*CGAA
- Length
- 14 nucleotides
- Bulged bases
- 6ZU5|1|L50|A|571, 6ZU5|1|L50|G|678
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ZU5_003 not in the Motif Atlas
- Homologous match to J3_8C3A_003
- Geometric discrepancy: 0.0908
- The information below is about J3_8C3A_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_39238.5
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
6ZU5|1|L50|U|568
6ZU5|1|L50|G|569
6ZU5|1|L50|A|570
6ZU5|1|L50|A|571
6ZU5|1|L50|C|572
6ZU5|1|L50|U|573
6ZU5|1|L50|A|574
*
6ZU5|1|L50|U|659
6ZU5|1|L50|A|660
6ZU5|1|L50|G|661
*
6ZU5|1|L50|C|677
6ZU5|1|L50|G|678
6ZU5|1|L50|A|679
6ZU5|1|L50|A|680
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain LA0
- uL2
- Chain LJJ
- eL37
- Chain LLL
- eL39
- Chain LN0
- eL15
Coloring options: