J3_6ZU5_013
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUC*GAG*CAAACG
- Length
- 12 nucleotides
- Bulged bases
- 6ZU5|1|L50|A|2100
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ZU5_013 not in the Motif Atlas
- Homologous match to J3_5TBW_013
- Geometric discrepancy: 0.1335
- The information below is about J3_5TBW_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_91491.5
- Basepair signature
- cWW-F-tWW-tHW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
6ZU5|1|L50|C|2061
6ZU5|1|L50|U|2062
6ZU5|1|L50|C|2063
*
6ZU5|1|L50|G|2087
6ZU5|1|L50|A|2088
6ZU5|1|L50|G|2089
*
6ZU5|1|L50|C|2098
6ZU5|1|L50|A|2099
6ZU5|1|L50|A|2100
6ZU5|1|L50|A|2101
6ZU5|1|L50|C|2102
6ZU5|1|L50|G|2103
Current chains
- Chain L50
- 25S rRNA
Nearby chains
- Chain L70
- 5S ribosomal RNA; 5S rRNA
- Chain LD0
- uL18
- Chain LJ0
- uL5
- Chain LNN
- Lso2
- Chain LT0
- eL21
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