J3_6ZU5_016
3D structure
- PDB id
- 6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Paranosema locustae ribosome in complex with Lso2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCAUAU*AG*UA
- Length
- 10 nucleotides
- Bulged bases
- 6ZU5|1|L70|U|12
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ZU5_016 not in the Motif Atlas
- Homologous match to J3_5TBW_045
- Geometric discrepancy: 0.2077
- The information below is about J3_5TBW_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_52398.1
- Basepair signature
- cWW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
6ZU5|1|L70|U|9
6ZU5|1|L70|C|10
6ZU5|1|L70|A|11
6ZU5|1|L70|U|12
6ZU5|1|L70|A|13
6ZU5|1|L70|U|14
*
6ZU5|1|L70|A|65
6ZU5|1|L70|G|66
*
6ZU5|1|L70|U|109
6ZU5|1|L70|A|110
Current chains
- Chain L70
- 5S rRNA
Nearby chains
- Chain L50
- Large subunit ribosomal RNA; LSU rRNA
- Chain LD0
- uL18
- Chain LI0
- uL16
- Chain LJ0
- uL5
- Chain LT0
- eL21
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