J3_7ASN_001

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GC*GUGAAAAG*CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ASN_001 not in the Motif Atlas

Homologous match to J3_7A0S_001

Geometric discrepancy: 0.1268

The information below is about J3_7A0S_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_68715.2

Basepair signature

cWW-cWW-cWW-tWH-tSH-F-F

Number of instances in this motif group

11

Unit IDs

7ASN|1|A|G|30
7ASN|1|A|C|31
*
7ASN|1|A|G|520
7ASN|1|A|U|521
7ASN|1|A|G|522
7ASN|1|A|A|523
7ASN|1|A|A|524
7ASN|1|A|A|525
7ASN|1|A|A|526
7ASN|1|A|G|527
*
7ASN|1|A|C|554
7ASN|1|A|C|555

Current chains

Chain A

23S

Nearby chains

Chain O

50S ribosomal protein L20

Chain S

50S ribosomal protein L24