J3_7AZO_039
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CC*GUGGAU*AAUCG
- Length
- 13 nucleotides
- Bulged bases
- 7AZO|1|23SA|G|2846
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZO_039 not in the Motif Atlas
- Homologous match to J3_9DFE_019
- Geometric discrepancy: 0.1714
- The information below is about J3_9DFE_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76911.2
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7AZO|1|23SA|C|2827
7AZO|1|23SA|C|2828
*
7AZO|1|23SA|G|2844
7AZO|1|23SA|U|2845
7AZO|1|23SA|G|2846
7AZO|1|23SA|G|2847
7AZO|1|23SA|A|2848
7AZO|1|23SA|U|2849
*
7AZO|1|23SA|A|2895
7AZO|1|23SA|A|2896
7AZO|1|23SA|U|2897
7AZO|1|23SA|C|2898
7AZO|1|23SA|G|2899
Current chains
- Chain 23SA
- 23S rRNA
Nearby chains
- Chain L17A
- 50S ribosomal protein L17
- Chain L32A
- 50S ribosomal protein L32
- Chain L3A
- 50S ribosomal protein L3
Coloring options: